Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MACGLVASNLNLKPGECLRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVFPFQPGSVAEVCITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADGDFKIKCVAFD
3OY8 Chain:A ((1-134))
-ACGLVASNLNLKPGECLRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVFPFQPGSVAEVCITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADGDFKIKCVAFD
General information:
TITO was launched using:
RESULT:
Template:
3OY8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73189 for 999 contacts (-73.3/contact) +
2D Compatibility (PS) -14058 + (NN) -2127 + (LL) 208
1D Compatibility (HY) -18400 + (ID) 6700
Total energy: -114266.0 ( -114.38 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_3OY8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OY8-query.scw
PDB file :
Tito_Scwrl_3OY8.pdb
: