Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEECLVRTT
2OPY Chain:A ((1-106))
---------NFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEECLVR--
General information:
TITO was launched using:
RESULT:
Template:
2OPY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17618 for 751 contacts (-23.5/contact) +
2D Compatibility (PS) -11606 + (NN) -7528 + (LL) 512
1D Compatibility (HY) -14400 + (ID) 5300
Total energy: -55940.0 ( -74.49 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_2OPY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OPY-query.scw
PDB file :
Tito_Scwrl_2OPY.pdb
: