Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSPAPRPPRCLLLPLLTLGTALASLGSAQSSSFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATYEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTENFVLPDDDRRGIQQLYGGESGFPTKMPPQPRTTSRPSVPDKPKNPTYGPNICDG--NFDTVAMLRGEMFVFKERWFWRVRNNQVMDGYPMP----IGQFWRGLPASINTAYERKDGKFV-FFKGDKHWVFDEASLEPGYPKHI-KELGRGLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEELRAVDSEYPKNI-KVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKVEPGYPKSALRDWMGCPSGGRPDEGTEEETEVIIIEVDEEGGGAVSAAAVVLPVLLLLLVLAVGLAVFFFRRHGTPRRLLYCQRSLLDKV |
1FBL Chain:A ((9-367)) | ---------------------------------------------------------------------------------------------------------------------RWENTHLTYRIENYTPDLSREDVDRAIEKAFQLWSNVSPLTFTKVS--------EGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTKNFRDYN---LYRVAAHELGHSLGLSHSTDIGALMYPNYIY--TGDVQLSQDDIDGIQAIYG-----PSENPVQP---SGPQT----------PQVCDSKLTFDAITTLRGELMFFKDRFYMRTNS-----FYPEVELNFISVFWPQVPNGLQAAYEIADRDEVRFFKGNKYWAVRGQDVLYGYPKDIHRSFGFPSTVKNIDAAVFEEDTGKTYFFVAHECWRYDEYKQSMDTGYPKMIAEEFPGIGNKVDAVF--QKDGFLYFFHGTRQYQFD---FKTKRILTLQKANSWFNC-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157639 for 2740 contacts (-57.5/contact) +
2D Compatibility (PS) -38114 + (NN) -21826 + (LL) 12960
1D Compatibility (HY) -26000 + (ID) 7500
Total energy: -238119.0 ( -86.90 by residue)
QMean score : 0.269
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