Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
YSLFPNSPKWTSKVVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDERWTDGSSLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGN-GDPQNFKLSQDDIKGIQKLYGKRSNSRKK
1D7X Chain:A ((1-169))
FRTFPGIPKWRKTHLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWTKDTT-GTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYGPPPD----
General information:
TITO was launched using:
RESULT:
Template:
1D7X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66851 for 1280 contacts (-52.2/contact) +
2D Compatibility (PS) -18367 + (NN) -12235 + (LL) 376
1D Compatibility (HY) -15200 + (ID) 4650
Total energy: -116927.0 ( -91.35 by residue)
QMean score : 0.845
(partial model without unconserved sides chains):
PDB file :
Tito_1D7X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D7X-query.scw
PDB file :
Tito_Scwrl_1D7X.pdb
: