Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLEKTVKEKLSFEGVGIHTGEYSKLIIHPEKEGTGIRFFKNG----VYIPARHEFVVHTNHSTDLGFKGQRIKTVEHILSVLHLLEITNVTIEVIGNEIPILDGSGWEFYEAIRKNILNQNREIDYFV-VEEPIIVEDEGRLIKAEPSDTLEVTYEGEFKNFLGRQKFTFVEGNE----EEIVLARTFCFDWEIEHIKKVGLGKGGSLKNTLVLGKDKVYNPEGLRYENEPVRHKVFDLIGDLYLLGSPVKGKFYSFRGGHSLNVKLVKELAKKQKLTRDLPHLPSVQAL |
| 4J3D Chain:A ((4-274)) | ---QRTLKNIIRATGVGLHSGEKVYLTLKPAPVDTGIVFCRTDLDPVVEIPARAENVGETTMSTTLVKGDVKVDTVEHLLSAMAGLGIDNAYVELSASEVPIMDGSAGPFVFLIQSAGLQEQEAAKKFIRIKREVSVEEGDKRAVFVPFDGFKVSFEID--------QQASVDFSSTSFVKEVSRARTFGFMRDIEYLRSQNLALGGSVENAIVVDENRVLNEDGLRYEDEFVKHKILDAIGDLYLLGNSLIGEFRGFKSGHALNNQLLRTL------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114224 for 2119 contacts (-53.9/contact) +
2D Compatibility (PS) -27326 + (NN) -7392 + (LL) 2112
1D Compatibility (HY) -15600 + (ID) 4750
Total energy: -167180.0 ( -78.90 by residue)
QMean score : 0.549
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