Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDSFNYTTPDYGHYDDKDTLDLNTPVDKTSNTLRVPDILALVI---FAVVFLVGVLGNALVVWV-TAFEAKRTINAIWFLNLAVADFLSCLALPILFTSIVQHHHWPFGGAACSILPSLILLNMYASILLLATISADRFLLVFKPIWCQNFRGAGLAWIACAVAWGLALLLTIPSFLYRVVREEYFPPKVLCGVDYSHDKRRERAVAIVRLVLGFLWPLLTLTICYTFI---LLRTWSRRAT-------------------------------------------------RSTKTLKVVVAVVASFFIFWLPYQVTGIMMSFLE----PSSPTFLLLKKLDSLCVSFAYINCCINPIIYVVAGQGFQGRL----RKSLPSLLRNVLTEESVVRESKSFTRSTVDTMAQKTQAV |
| 4MBS Chain:A ((21-366)) | ----------------------------PCQKINVKQIAARLLPPLYSLVFIFGFVGNMLVILILINYKRLKSMTDIYLLNLAISDLFFLLTVP--FWAHYAAAQWDFGNTMCQLLTGLYFIGFFSGIFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPNIIFTRSQKEGLHYTCSSHFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFEEVEEEKKRHRDVRLIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLGMTHCCINPIIYAFVGEEFRNYLLVFFQ-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MBS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -272643 for 2054 contacts (-132.7/contact) +
2D Compatibility (PS) -29197 + (NN) -10024 + (LL) 3880
1D Compatibility (HY) -35200 + (ID) 3450
Total energy: -346634.0 ( -168.76 by residue)
QMean score : 0.304
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