Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEECWVTEIANGSKDGLDSNPMKDYMILSGPQKTAVAVLCTLLGLLSALENVAVLYLILSSHQLRRKPSYLFIGSLAGADFLASVVFACSFVNFHVFHGVDSKAVFLLKIGSV--TMTFTASVGSLLLTAIDRYLCLRYPPSYKALLTRGRALVTLGIMWVLSALVSYLPLM--GWT--------------CCPRPCSELFPLIPNDYLLSWLLFIAFLFSGIIYTYGHVLWKAHQHVASLSGHQDRQVPGMARMRLDVRLAKTLGLVLAVLLICWFPVLALMAHSLATTLSDQVKKAFAFCSM--LCLINSMVNPVIYALRSGEIRSSAHHCLAHWKKCVRGLGSEAKEEAPRSSVTETEADGKITPWPDSRDLDLSDC |
| 2YCW Chain:A ((5-299)) | --------------------------LLSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQ-TLTNLFITSLACADLVVGLL-VVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASS--IIS--FYIPLLI--MIFVALRVYREAKEQIRKIDRASKRKRVMLMR---EHKALKTLGIIMGVFTLCWLPFFLV---NIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAF-------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YCW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -210229 for 2033 contacts (-103.4/contact) +
2D Compatibility (PS) -28264 + (NN) -13197 + (LL) 4392
1D Compatibility (HY) -31200 + (ID) 4200
Total energy: -282698.0 ( -139.05 by residue)
QMean score : 0.309
|
|
|