Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METNFSIPLNETEEVLPEPAGHTVLWIFSLLVHGVTFVFGVLGNGLVIWVAGFRMTR--TVNTICYLNLALADFSFSAILPFRMVSVAMREKWPFGSFLCKLVHVMIDINLFVSVYLITIIALDRCICVLHPAWAQNHRTMSLAKRVMTGLWIFTIVLTLPNFIFWTTISTTNGDTYCIFNF----AFWGDTAVERLNVFITMAKVFLILHFIIGFSVPMSIITVCYGIIAAKIHRNHMIKSSRP--------LRVFAAVVASFFICWFPYELIGILMAVWLKEMLLNGKYKIILVLINPTSSLAFFNSCLNPILYVFMGRNFQERLIRSLPTSLERALTEVPDSAQTSNTDTTSASPPEETELQAM |
| 4EA3 Chain:A ((137-401)) | -------------------------------------VGGLLGNCLVMYVI-LRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILL-GFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------TSSKAQAVNVAIWALASVVGVPVAIMGSA-QVEDEEIECLVEIPTPQDYWG--------------PVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQVF-----VLAQGLGVQPSSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFR--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -269187 for 1784 contacts (-150.9/contact) +
2D Compatibility (PS) -24595 + (NN) -5232 + (LL) 7640
1D Compatibility (HY) -26400 + (ID) 4150
Total energy: -321924.0 ( -180.45 by residue)
QMean score : 0.231
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