Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNVSGCPGAGNASQAGGGGGWHPEAVIVPLLFALIFLVGTVGNTLVLAVLLRGGQAVSTTNLFILNLGVADLCFILCCVPFQATIYTLDGWVFGSLLCKAVHFLIFLTMHASSFTLAAVSLDRYLAIRYPLHSRELRTPRNALAAIGLIWGLSLLFSG-PYLSYYRQSQLANLTVCHPA---WSAPRRRAMDICTFVFSYLLPVLVLGLTYARTLRYLWRAVDPVAAGSGARRA----KRKVTRMILIVAALFCLCWMPHHALILCVWFGQFPLTRATYALRILSHLVSYANSCVNPIVYALVSKHFRKGFRTICAGLLGRAPGRASGRVCAAARGTHSGSVLERESSDLLHMSEAAGALRPCPGASQPCILEPCPGPSWQGPKAGDSILTVDVA
2YCZ Chain:A ((9-299))--------------QWEAG--------MSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIV---NVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCR-SPDFRKAFKRLLAF------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -231982 for 2068 contacts (-112.2/contact) +
2D Compatibility (PS) -29049 + (NN) -10480 + (LL) 4144
1D Compatibility (HY) -26000 + (ID) 4350
Total energy: -297717.0 ( -143.96 by residue)
QMean score : 0.250

(partial model without unconserved sides chains):
PDB file : Tito_2YCZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YCZ-query.scw
PDB file : Tito_Scwrl_2YCZ.pdb: