Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVFAHRMDNSKPHLIIPTLLVPLQNRSCTETATPLPSQYLMELSEEHSWMSNQTDLHYVLKPGEVATASIFFGILWLFSIFGNSLVCLVIHRSRRTQSTTNYFVVSMACADLLISVASTPFVLLQFTTGRWTLGSATCKVVRYFQYLTPGVQIYVLLSICIDRFYTIVYPLSFKVSR--EKAKKMIAASWVFDAGFVTPVLFFYG--------SNWDSHCNYFLPSSWEGTAYTVIHFLVGFVIPSVLIILFYQKVIKYIW-RIGTDGRTVRRTMNIV--PRTKVKTIKMFLILNLLFLLSWLPFHVAQLWHPHEQDYKKSSLVFTAITWISFSSSASKPTLYSIYNANFRRGMKETFCMSSMKCYRSNAYTITTSSRMAKKNYVGISEIPSMAKTITKDSIYDSFDREAKEKKLAWPINSNPPNTFV |
| 4MQS Chain:A ((36-330)) | ------------------------------------------------------------KTFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFF-----SNAAVTFGTAIAAFYLPVIIMTVLYWHISRASKS----------------PPPSREKKVTRTILAILLAFIITWAPYNVMVLINTFCAPCIPNT-VWTIGYWLCYINSTINPACYALCNATFKKTFKHLLM--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191675 for 1962 contacts (-97.7/contact) +
2D Compatibility (PS) -26338 + (NN) -4131 + (LL) 9640
1D Compatibility (HY) -27200 + (ID) 3800
Total energy: -243504.0 ( -124.11 by residue)
QMean score : 0.236
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