Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSENGSFANCCEAGGWAVRPGWSGAGSARPSRTPRPPWVAPALSAVLIVTTAVDVVGNLLVILSVLRNRKLRNAGNLFLVSLALADLVVAFYPYPLILVAIFYDGWALGEEHCKASAFVMGLSVIGSVFNITAIAINRYCYICHSMAYHRIYRRWHTPLHICLIWLLT-VVALLPNFFVGSLEYDPRIYS-------CTFIQTASTQYTAAVVVIHFLLPIAVVSFCYLRIWVLVLQARRK--AKPESRLCLKPSDLRSFLTMFVVFVIFAICWAPLNCIGLAVAINPQEMAPQIPEGLFVTSYLLAYFNSCLNAIVYGLLNQNFRREYKRILLALWNPRHCIQDASKGSHAEGLQSPAPPIIGVQHQADAL |
| 2YCY Chain:A ((13-297)) | -----------------------------------------GMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRA--YAIASSIISFYIPLLIMIFVALRVYREAKEQIR-DRASKRKRVMLM-REHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRD----LVPDWLFVAFNWLGYANSAMNPIIY-CRSPDFRKAFKRLLAF------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -266310 for 2029 contacts (-131.3/contact) +
2D Compatibility (PS) -27811 + (NN) -5313 + (LL) 2648
1D Compatibility (HY) -27600 + (ID) 3900
Total energy: -328286.0 ( -161.80 by residue)
QMean score : 0.332
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