Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPANFTEGSFDSSGTGQTLDSSPVACTETVTFTEVVEGKEWGSFYYSFKTEQLITLWVLFVFTIVGNSVVLFSTWRRKKKSRMT-FFVTQLAITDSFTGLVNILTDINWRFTGDFTAPDLVCRVVRYLQVVLLYASTYVLVSLSIDRYHAIVYPMKF--LQGEKQARVLIVIAWSLSFLFSIPTLIIFGKRTLSNGEVQCWALWPDDSYWTPYMTIVAFLV------YFIPLTIISIMYGIVIRTIWIKSKTYETVISNCSDGKLCSSYNRGLISKAKIKAIKYSIIIILAFICCWSPYFLFDILDNFN--LLPDTQERFYASVIIQNLPALNSAINPLIYC-------VFSSSISFPCREQRSQDSRMTFRERTERHEMQILSKPEFI |
| 2Y02 Chain:A ((3-300)) | --------------------------------------AELLSQQWEAGMSLLMALVVLLI--VAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCY----QDPGCCDFVTNRAYAIASSIISFYIPLL---IMIFVALR-VYREAKEQ----------------SRVMLMREH-KALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPD-----WLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLLA--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187885 for 1900 contacts (-98.9/contact) +
2D Compatibility (PS) -27132 + (NN) -4218 + (LL) 6376
1D Compatibility (HY) -30000 + (ID) 4000
Total energy: -246859.0 ( -129.93 by residue)
QMean score : 0.194
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