Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPRKNVTDFVLLGFTQNPKEQKVLFVMFLLFYILTMVG---NLLIVVTVTVSETLGSPMYFFLAGLSFIDII-----YSSSISPRLISGLFFGNNSISFQSCMAQLFIEHIFGGSEVFL--LLVMAYDCYVAICKPL--------HYLV-IMRQWV----CVVLLVVSWVGGFLHSVFQLSIIYGLPFCGPNVIDHFFCDMYPLLKLVCTDTHAIGLLVVANGGLACTIVFLLLLISYGVILHSLKNLSQKGR-----QKALSTCSSHMTVVVFFFVPCIFMYARPARTF---------PIDKSVSVFYTVITPMLNPLIYTLRNSEMTSAMKKLWRRDLISSST |
| 2X72 Chain:A ((48-318)) | --------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLQGFFATL-------GGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGW-SRYIPEGMQCS-------CG--------IDYYTPHEETNNESFVIYMFVV-----HFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSCFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211083 for 1690 contacts (-124.9/contact) +
2D Compatibility (PS) -22907 + (NN) -789 + (LL) 5000
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -232179.0 ( -137.38 by residue)
QMean score : 0.115
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