Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSSGSSHPFLLTGFPGLEEAHHWISVFFLFMYISILFGNGTLLLLIKEDHNLHEPMYFFLAMLAATDLGLALTTMPTVLGVLWLDHREIGSAA----CFSQAYFIHSLSFLESGILLAMAYDRFIAICNPLRYTSVLTNTR---------VVKIGLGVL-MRGFVSVVPPIRPLYFFLYCHSHVLSHAFCLHQDVIKLACADTTFNRLYPAVLVVFIFVLD-YLIIFISYVLILKTVLSIASREERAKALITCVSHICCVLVFYVTVIGLS-----LIHRFGKQVPHIVHLIMSYAYFLF-----PPLMNPITYSVKTKQIQNAILHLFTTHRIGT |
4UHR Chain:A ((21-306)) | ------------------------------------ILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIAI------STGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKA---GCGEGQVA---CLFEDVVPM--NYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC-HAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216917 for 1863 contacts (-116.4/contact) +
2D Compatibility (PS) -26058 + (NN) -12695 + (LL) 4104
1D Compatibility (HY) -21600 + (ID) 3400
Total energy: -276566.0 ( -148.45 by residue)
QMean score : 0.263
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