Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIQPMASPSNSSTVPVSEFLLICFPNFQSWQHWLSLPLSLLFLLAMGANTTLLITIQLEASLHQPLYYLLSLLSLLDIVLCLTVIPKVLAIFWYDLRSISFPACFL-QMFIMNSFLPMESC--TFMVMAYDRYVAICHPLRYPSIITNQFVAKASVFIVVRNALLTAPIPILTSLLHYCGENVIENCICANLSVSRLSCDNFTLNRIYQFVAG-WTLLGSDLFLIFLSYTFILRAVLRFKAEGAAV---------KALSTCGSHFILILFFSTILLVVVLTNVA----RKKVPMDILILLNVLHHLIPPALNPIVYGVRTKEIKQGIQKLLQRGR |
| 4AMJ Chain:A ((8-299)) | ---------------------------QQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLV---VRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTR---ARAKVIICTVWA-ISALVSFLPIMMHWWRDEDPQALKCYQDP----GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ--------SRVMLMREHKALKTLG---IIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGY-ANSAMNPIIY-CRSPDFRKAFKRLLA--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4AMJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -231668 for 1926 contacts (-120.3/contact) +
2D Compatibility (PS) -26874 + (NN) -10872 + (LL) 3756
1D Compatibility (HY) -30400 + (ID) 3700
Total energy: -299758.0 ( -155.64 by residue)
QMean score : 0.238
|
|
|