Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDGDNQSENSQFLLLGISESPEQQRILFWMFLSMYLVTVLGNVLIILAISSDSHLHTPMYFFLANLSFTDLFFVTNTIPKMLVNFQSQNKAISYAGCLTQLYFLVSLVTLDNLILAVMAYDRYVATCCPLHYVTAMSPGLCVLLLSLCWGLSVLYGLLLTFLL------------TRVTFCGPREIHYLFCDMYILLWLACSNTHIIHTALIATGCFIFLTPLGFMTTSYVRIV----RTILQMPS----ASKKYKTFSTCASHLGVVSLFYGTLAMVYLQPLH-----TYSMKDSVAT---VMYAVL-----TPMMNPFIYRLRNKDMHGAPGRVLWRPFQRPK |
| 4UHR Chain:A ((14-294)) | -------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIA--ISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIG--LTPMLGWNNCGQPKEGKA---GCGEGQVACLFEDVVPM-------NYMVYFNFFAC----VLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWL-PLHIINCFTFFCPDC-HAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -236930 for 1819 contacts (-130.3/contact) +
2D Compatibility (PS) -24200 + (NN) -3213 + (LL) 3944
1D Compatibility (HY) -26000 + (ID) 3500
Total energy: -289899.0 ( -159.37 by residue)
QMean score : 0.308
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