Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEPQNTTQVSMFVLLGFSQTQELQKFLFLLFLLVYVTTIVGNLLIMVTVTFDCRLHTPMYFLLRNLALIDLCYSTVTSPKMLVDFLHETKTISYQGCMAQIFFFHLLGGGTVFFLSVMAYDRYIAISQPLRYVTIMNTQLCVGLVVAAWVGGFVHSIVQLALILPLPFCGPNILDNFYCDVPQVLRLAC--TDTSLLEFLMISNSGLLVIIWFLLLLISYTVILVMLRSHSGKARRKAASTCTTHI-IVVSMIFIPCIYIYTW-P---------FTP-------FLMDKAVSISYTVMTPMLNPMIYTLRNQDMKAAMRRLGKCLVICRE |
4UG2 Chain:A ((14-302)) | -------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIA--ISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFA---IGLTPMLGWNNCGQPKEGKAHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQL------ARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHT--NSVVNPFIYAYRIREFRQTFRKIIRSHVLR-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4UG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -261495 for 1993 contacts (-131.2/contact) +
2D Compatibility (PS) -25681 + (NN) -3990 + (LL) 3964
1D Compatibility (HY) -21200 + (ID) 3350
Total energy: -311752.0 ( -156.42 by residue)
QMean score : 0.319
|
|
|