Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDSLNQTRVTEFVFLGLTDNRVLEMLFFMAFSAIYMLTLSGNILIIIATVFTPSLHTPMYFFLSNLSFIDI----CHSSVTVPKMLEGLLLERKTISFDNCITQLFFLHLFACAEIFLLIIVAYDRYVAICTPLHYPNVMNMRVCIQLVFALWLGGTVHS-LGQTFLTIRLPYCGPNIIDSYFCDVPLVIKLACTDTYLTGILIVTNSGTISLSCFLAVVTSYMVI------LVSLRKHSAEGRQKALSTCSAH--------FMVVAL------FFGPCIFIYTRPDTSFS-IDKVVSVFYTVVTPLLNPFIYTLRNEEVKSAMKQLRQRQVFFTKSYT |
| 3DQB Chain:A ((49-317)) | -----------------------------------MLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPT----GCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS-----NFRF-----------GENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209981 for 1811 contacts (-115.9/contact) +
2D Compatibility (PS) -23943 + (NN) 2145 + (LL) 6012
1D Compatibility (HY) -20800 + (ID) 3200
Total energy: -249767.0 ( -137.92 by residue)
QMean score : 0.115
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