Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENKTEVTQFILLGLTNDSELQVPLFITFPFIYIITLVGNLGIIVLIFWDSCLHNPMYFFLSNLSLVDFCYSSAVTPIVMA---GFLIEDKVISYNACAAQMYI--FVAFATVEN-YLLASMAYDRYAAVCKPLHYTTTMTTTVCARLAIGSYLCGFLNASIHTGDTFSLSFC---KSNEVHHFFCDIPAVMVLSCSDRHISELV-LIYVVSFNIF----IALLVILISYTFIFITILKM------------HSASVYQKPLSTCASHFIAVGIFYGTII-------FMYLQPSSSHSMDTDKMAPVFYTMVIPMLNPLVYSLRNKEVKSAFKKVVEKAKLSVGWSV |
| 4UHR Chain:A ((16-304)) | -------------------------------IAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIAISTGFC--------AACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTR-AKGIIA--ICWVLSFAIGLTPMLGWNNCGQPKEGKA---GCGEGQVACL------FEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC-HAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227364 for 1866 contacts (-121.8/contact) +
2D Compatibility (PS) -25327 + (NN) -990 + (LL) 3652
1D Compatibility (HY) -24800 + (ID) 3450
Total energy: -278279.0 ( -149.13 by residue)
QMean score : 0.267
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