Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEARNQTAISKFLLLGLIEDPELQPVLFSLFLSMYLVTILGNLLILLAVISDSHLHTPMYFFLSNLSFLDICLSTTTIPKMLVNIQAQNRSITYSGCLTQICFVLFFAGLENCLLAAMAYDRYVAICHPLRYT-VIMNPRLCGLLILLSLLTSVVNALLLSLMVLRLSFCTDLEIPLFFCELAQVIQLTC--SDTLINNILIYFA--ACIFGGVPLSGIILSYTQITSCVLR---------MPSASGK---HKAVSTCGSHLSIVLLFYGAGLGVYISSVVT------DSPRKTAVASVMYSVFPQMVNPFIYSLRNKDMKGTLRKFIGRIPSLLWCAICFGFRFLE |
4UHR Chain:A ((8-303)) | -------------------------VYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIA--ISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIG---LTPM-LGWNNCGQPKEGKA---GCGEGQVACLFEDVVPMNYMVYFNFFACVL--VPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFKAAAA--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4UHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -283263 for 2123 contacts (-133.4/contact) +
2D Compatibility (PS) -26435 + (NN) 2535 + (LL) 2940
1D Compatibility (HY) -24000 + (ID) 4000
Total energy: -332223.0 ( -156.49 by residue)
QMean score : 0.345
|
|
|