Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQAVDNLTSAPGNTSLCTRDYKITQVLFPLLYTVLFFVGLITNGLAMRIFF---QIRSKSNFIIFLKNTVISDLLMILTFPFKILSDAKLGTGPLRTFVCQVTSVIFYFTMYISISFLGLITIDRYQKTTRPFKTSNPKNLLGAKILSVVIWAFMFLLSLPNMILTNRQPRDKNVKKCSFLKSEFGLVWHEIVNYICQVIFW--INFLIVIVCYTLITKELYRSYVRTRGVGKVPR--KKVNVKVFIIIAVFFICFVPFHFARIPYTLSQTRDVFDCTAENTLFYVKESTLWLTSLNACLDPFIYFFLCKSFRNSLISMLKCPNSATSLSQDNRKKEQDGGDPNEETPM |
| 4EA3 Chain:A ((131-401)) | ------------------------------LYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIF--NLALADTLVLLTLPFQG-TDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------TSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEI-ECLVEIPTPQDYWGPVF-AICIFLFSFIVPVLVISVCYSLMIRRL-RGVRLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQV----FVLAQGLGV-QPSSETAVAILRFCTA-LGYVNSCLNPILYAFLDENFKACFR-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214070 for 1917 contacts (-111.7/contact) +
2D Compatibility (PS) -25585 + (NN) -631 + (LL) 3632
1D Compatibility (HY) -25200 + (ID) 3700
Total energy: -265554.0 ( -138.53 by residue)
QMean score : 0.227
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