Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSTCIEEQHDLDHYLFPIVYIFVIIVSIPANIGSLCVSFLQAKKESELGIYLFSLSLSDLLYALTLPLWIDYTWNKDNWTFSPALCKGSAFLMYMNFYSSTAFLTCIAVDRYLAVVYPLKFFFLRTRRFALMVSLSIWILETIFNAVMLWEDETVVEYCDAEKSNFTLCYDKYPLEKWQINLNLFRTCT---GYAIPLVTILIC-NRKVYQAVRHNKATENKEK----KRIIKLLVSITVTFVLCFTPFHVMLLIRCILEHAVNFEDHSNSGKRTYTMYRITVALTSLNCVADPILYCFVTETGRYDMWNILKFCTGRCNTSQRQRKRILSVSTKDTMELEVLE |
| 4RWD Chain:A ((152-396)) | -------------------------------------------KMKTATNIYIFNLALADALATSTLPFQ-SAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIM------VMAVTRPRDGAVVCMLQFPSPSWYWD-TVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLV-------DIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC-------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4RWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -158803 for 1674 contacts (-94.9/contact) +
2D Compatibility (PS) -24564 + (NN) -6439 + (LL) 7416
1D Compatibility (HY) -22800 + (ID) 3100
Total energy: -208290.0 ( -124.43 by residue)
QMean score : 0.275
|
|
|