Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNATGTPVAPESCQQLAAGGHSRLIVLHYNHSGRLAGRGGPEDGGLGALRGLSVAASCLVVLENLLVLAAITSHMRSRRWVYYCLVNITLSDLLTGAAYLANVLLSGARTFRLAPAQWFLR--EGLLFTAL------AASTFSLLFTAGERFATMVRPVAESGATKTSRVYGFIGLCWLLAALLGMLPLLGWN-----------CLCAFDRCSSLLPLYSKRYILFCLVIFAGVLATI---MGLYGAIF-----RLVQASGQKAPRPAAR---RKARRLLKTVLMILLAFLVCWGPL-----FGLLLADVFGSNLWAQEYLRGMDWILALAVLNSAVNPIIYSFRSREVCRAVLSFLCCGCLRLGMRGPGDCLARAVEAHSGASTTDSSLRPRDSFRGSRSLSFRMREPLSSISSVRSI |
| 3REY Chain:A ((12-294)) | ---------------------------------------------------VELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVL---------AIPFAITISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQPGCGEGQVACLFE---DVVPMNYMVYFNF----FACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWL------MYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3REY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184162 for 1722 contacts (-106.9/contact) +
2D Compatibility (PS) -24859 + (NN) -13064 + (LL) 6352
1D Compatibility (HY) -24000 + (ID) 4200
Total energy: -243933.0 ( -141.66 by residue)
QMean score : 0.219
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