Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHTLYPTPFALYPINISAAWHLGPLPVSCFVSNKYQCSLAFGATTGLRVLVVVVPQTQLSFLSSLCLVSLFLHSLVSAHGEKPTKPVGLDPTLFQVVVGILGNFSLLYYYMFLYFRGYKPRSTDLILRHLTVADSLVILSKRIPETMAT-FGLKHFDNYFGCKFLLYAHRVGRGVSIGSTCLLSV--FQVITINPRNSRWAEMKVKAPTYIGLSNILCWAFHMLVNAIFPIYTTGKWSNNNITKKGDLGYCSAPLSDEV--TKSVYAALTSFHDVLCLGLMLWASSSIVLVLYRHKQQVQHIC-------RNNLYPNSSPGNRAIQSILALVSTFALCYALSFITYVYLALFDN--SSWWLVNTAALIIACFPTISPFVLMCRDPSRSRLCSICCRRNRRFFHDFRKM |
| 2Z73 Chain:A ((40-334)) | -------------------------------------------------------------------------------------------FIGICGIIGCGGNGIVIYLFTKT---KSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIG-RPMAAS----KKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTL------EGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143490 for 2253 contacts (-63.7/contact) +
2D Compatibility (PS) -28677 + (NN) -7729 + (LL) 7320
1D Compatibility (HY) -11600 + (ID) 1950
Total energy: -186126.0 ( -82.61 by residue)
QMean score : 0.239
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