Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGAVSCRQGQHTQQGEHTRVAVPHKQGGNIRGPWARGWKSLWTGLGTIRSDLEELWELRGHHYLHQESLKPAPVLVEKPLPEWPVPQFINLFLPEFPIRPIRGQQQLKILGLVAKGSFGTVLKVLDCTQKAVFAVKVVPKVKVLQRDTVRQCKEEVSIQ-RQINHPFVHSLGDSWQGKRHLFIMCSYCST-DLYSLWSAVGCFPEASIRLFAAELVLVLCYLHDLGIMHRDVKMENILLDERGHLKLTDFGLSR-HVPQGAQAYTICGTLQYMGERG |
| 3HDN Chain:A ((32-207)) | --------------------------------------------------------------------------------------------------NPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAIL-------------VLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3HDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -93148 for 1030 contacts (-90.4/contact) +
2D Compatibility (PS) -16592 + (NN) -1087 + (LL) 6644
1D Compatibility (HY) -16000 + (ID) 2950
Total energy: -123133.0 ( -119.55 by residue)
QMean score : 0.330
|
|
|