Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGQVSSALAPCVAYAKGSGTSPSGACCSGVRKLAGLARSTADKQATCRCLKS--VAGGLNPNKAAGIPSKCGVSVPYTISASVDCSKIH
1L6H Chain:A ((1-69))
-AGC--NAGQLTVCTGAIAGGAR-PTAACCSSLRA---------QQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALP-------TCH---
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21828 for 504 contacts (-43.3/contact) +
2D Compatibility (PS) -6981 + (NN) -2447 + (LL) 1740
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -33666.0 ( -66.80 by residue)
QMean score : 0.366
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: