Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VVQCGQVTQLMAPCMPYLSGAPGMTPYGICCNSLGVLNQLAASTADRVAACNCVKAAASGGFPAVDFSRAAALPAACGLAINFAVTPNMDCNQVTDEP
1FK5 Chain:A ((1-93))
AISCGQVASAIAPCISYARGQGSG-PSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAG-VSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN---
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79304 for 669 contacts (-118.5/contact) +
2D Compatibility (PS) -9421 + (NN) -3394 + (LL) -232
1D Compatibility (HY) -5200 + (ID) 1850
Total energy: -99401.0 ( -148.58 by residue)
QMean score : 0.348
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: