Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------ALSCSTVYNELMPCLGYVQS---GGAVR----RACCSGIKTLVSRARAKPDRRAACACLKTVAAAAAGGPY----------LGRAAGLPGKCGVQPPFKIDPNVNCNAV----------
1HSS Chain:A ((5-124))
MCYPGQAFQ----VPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV--VDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47031 for 497 contacts (-94.6/contact) +
2D Compatibility (PS) -8351 + (NN) -5190 + (LL) 1044
1D Compatibility (HY) -4800 + (ID) 750
Total energy: -65078.0 ( -130.94 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: