Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATTACVPTQLTPCAPAIVGNAAPTAACCARLKAHPASCFCQYKKNPNMQRYVNSPNGKKVFAACKVPLPKC
1N89 Chain:A ((1-67))
---ACQASQLAVCASAILSGAKPSGECCGNLRAQ-QGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29311 for 433 contacts (-67.7/contact) +
2D Compatibility (PS) -6999 + (NN) -6207 + (LL) 108
1D Compatibility (HY) -7200 + (ID) 1350
Total energy: -50959.0 ( -117.69 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: