Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
CNINANHLEKCRPAVIGDNPPSPIKECCELLQAANLKCICRFKSV--LPVLAVYPSKVQALLSKCGLTTIPPACQALRN
2RKN Chain:A ((5-77))
CGMSQDELNECKPAVSKENPTSPSQPCCTALQHADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAP-TC-----
General information:
TITO was launched using:
RESULT:
Template:
2RKN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52188 for 484 contacts (-107.8/contact) +
2D Compatibility (PS) -7383 + (NN) -4479 + (LL) 320
1D Compatibility (HY) -4400 + (ID) 1400
Total energy: -69530.0 ( -143.66 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_2RKN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RKN-query.scw
PDB file :
Tito_Scwrl_2RKN.pdb
: