Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AEGAGECGRASADRVALRLAPCVSAADDPQ-SAPSSSCCSAVHTIGQSPSCLCAVMLSNTARVAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP
2RKN Chain:A ((2-75))
--------IDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHA--DFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAP-----------
General information:
TITO was launched using:
RESULT:
Template:
2RKN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29575 for 490 contacts (-60.4/contact) +
2D Compatibility (PS) -7311 + (NN) -1639 + (LL) 148
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -41827.0 ( -85.36 by residue)
QMean score : 0.135
(partial model without unconserved sides chains):
PDB file :
Tito_2RKN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RKN-query.scw
PDB file :
Tito_Scwrl_2RKN.pdb
: