Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTECVSKIVPCFRFLNTTT--KPSTDCCNSIKEAMEKDFSCLCTIYNTPGLLAQFNITTDQALGLNLRCGVNTDLSACSGTLILQDLRPLQL
2RKN Chain:A ((10-75))
-----DELNECKPAVSKENPTSPSQPCCTALQHA---DFACLCGYKNSP-WLGSFGVDPELASALPKQCGLANAP-----------------
General information:
TITO was launched using:
RESULT:
Template:
2RKN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45391 for 402 contacts (-112.9/contact) +
2D Compatibility (PS) -6349 + (NN) -743 + (LL) 1960
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -55873.0 ( -138.99 by residue)
QMean score : 0.204
(partial model without unconserved sides chains):
PDB file :
Tito_2RKN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RKN-query.scw
PDB file :
Tito_Scwrl_2RKN.pdb
: