Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASPTCDTVQNILAPCAGFLTGQEPSKACCTGVNNLNNSRKTKADRVAVCNCIKELTKSI-AYDPKRMPLLSTKCGVKPDFPAVDKNLDCSKLPV
1T12 Chain:A ((1-91))
-AITCGQVTSNLAPCLAYLRNTGPLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYK-ISPSTDCSKVQ-
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42225 for 677 contacts (-62.4/contact) +
2D Compatibility (PS) -9061 + (NN) -3989 + (LL) 480
1D Compatibility (HY) -6000 + (ID) 1550
Total energy: -62345.0 ( -92.09 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: