Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APGCDTVDTDLAPCISYLQTGTGNPTVQCCSGVKTLAGTAQTTEDRKAICECIKTAAIRVKPV-ANAVKSLPGLCSVTLPFPISIATDCNKIV
1FK5 Chain:A ((1-93))
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60742 for 656 contacts (-92.6/contact) +
2D Compatibility (PS) -9424 + (NN) -3287 + (LL) 0
1D Compatibility (HY) -6000 + (ID) 1950
Total energy: -81403.0 ( -124.09 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: