Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSCNTDLTDLVSKCQRFVIKTGPKFSPSPSCCAVVKNVDVACVCDLITKE-IED-MIDMDKMVYVARSCGKKISAGTKCGNTQANAGGIVSGYIVPTA
2RKN Chain:A ((3-77))
DLCGMSQDEL-NECKPAVSKENP-TSPSQPCCTALQHADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAP--TC-------------------
General information:
TITO was launched using:
RESULT:
Template:
2RKN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42001 for 498 contacts (-84.3/contact) +
2D Compatibility (PS) -7285 + (NN) -1402 + (LL) 660
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -52578.0 ( -105.58 by residue)
QMean score : 0.301
(partial model without unconserved sides chains):
PDB file :
Tito_2RKN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RKN-query.scw
PDB file :
Tito_Scwrl_2RKN.pdb
: