Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCSDVIKDLRPCVSYLMNGTGKPPAACCSGISAIQASASTTADKQAACNCIKSASKQI-NPSPQLAQALPANCGITLPFTVSPNVDCSK
1AFH Chain:A ((1-91))
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSR
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54306 for 733 contacts (-74.1/contact) +
2D Compatibility (PS) -9724 + (NN) -4232 + (LL) 0
1D Compatibility (HY) -6800 + (ID) 1850
Total energy: -76912.0 ( -104.93 by residue)
QMean score : 0.658
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: