Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QAGGCASQL--GNLNVCAPYVV----PG----AVNTNPS-------QECCAALSGV--NHDCMCNTLR---------------------VASQLPSSCNLAALN-CGN
1W2Q Chain:A ((13-118))
-SSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCD-
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37807 for 335 contacts (-112.9/contact) +
2D Compatibility (PS) -7062 + (NN) -3425 + (LL) 40
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -54454.0 ( -162.55 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: