Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QNCSAAI--GGLMSCGPYV----LPGN-QL----TPS-------TQCCSAIQAV--NHGCLCETIN---------------------IISSLPGHCSLPPVS-CGTA
1W2Q Chain:A ((14-119))
SSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDL-
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41993 for 331 contacts (-126.9/contact) +
2D Compatibility (PS) -6642 + (NN) -1446 + (LL) 144
1D Compatibility (HY) -6400 + (ID) 800
Total energy: -57137.0 ( -172.62 by residue)
QMean score : 0.333
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: