Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTCPSQL--NSLNVCAPFVV----PGATNT----NPN-------AECCSALQSV--EHDCLCNTLR---------------------IAARLPSQCNLAPVN-CGNW
1W2Q Chain:A ((14-118))
SSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCD--
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34143 for 336 contacts (-101.6/contact) +
2D Compatibility (PS) -6894 + (NN) -4813 + (LL) 76
1D Compatibility (HY) -5600 + (ID) 800
Total energy: -52174.0 ( -155.28 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: