Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSADCAATA--ESLSPCASAVG----NN--PQDP-----------TPECCAVLQTA--NVDCICALVQ---------------------STMQLPSECGLETPQ-CPSD
1W2Q Chain:A ((14-119))
--SSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDL-
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30728 for 339 contacts (-90.6/contact) +
2D Compatibility (PS) -6715 + (NN) -4970 + (LL) 16
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -48497.0 ( -143.06 by residue)
QMean score : 0.609
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: