Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSADCAATA--ELLSPCASAVG----NN--PQDP-----------TPECCAVLQTA--DVDCICALVE---------------------STIKLPSECGLDTPQ-CPSD
1W2Q Chain:A ((14-119))
--SSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDL-
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30748 for 339 contacts (-90.7/contact) +
2D Compatibility (PS) -6665 + (NN) -4831 + (LL) 16
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -47828.0 ( -141.09 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: