Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QISTSCTASMISSFTPCLNFITGSTSNGSSPTQGCCGAVKSLMSGSM-------DCACLIITAN-VPFQLPINRTLALGLPRACNMGGVPVQCKGGN
1AFH Chain:A ((3-80))
----SCGQVAS-AIAPCISYARGQ---GSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAAGVS-GLNAGNAASIPSKCGVSIP--------
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49919 for 511 contacts (-97.7/contact) +
2D Compatibility (PS) -7361 + (NN) -3534 + (LL) 688
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -64326.0 ( -125.88 by residue)
QMean score : 0.229
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: