Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DMSPSQCKEEQRLLVNACRAVIFG--RSPSPSCCERVR--------VTHVECVCPVITPQLAAL--IGVERTIKQIEGCG----RTVPHNFKCGSITTP
1FK5 Chain:A ((1-93))
AIS---CGQVASAI-APCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN--
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38073 for 510 contacts (-74.7/contact) +
2D Compatibility (PS) -7826 + (NN) 1221 + (LL) 56
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -47422.0 ( -92.98 by residue)
QMean score : 0.317
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: