Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-VDCTTVTGLLSTCSAFITYGSPDPYPGSPCCDAVMNLNLIADSTDNRKSVCGCLMGLITTYNP-NSTAIATLPGFCGVALGFTIDPNTDCNFVPLF
1FK5 Chain:A ((1-93))
AISCGQVASAIAPCISYARGQG--SGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN--
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93048 for 647 contacts (-143.8/contact) +
2D Compatibility (PS) -9344 + (NN) -3495 + (LL) 92
1D Compatibility (HY) -3200 + (ID) 1350
Total energy: -110345.0 ( -170.55 by residue)
QMean score : 0.271
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: