Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSCPQTI-TFSPCLTNVGNTG-TPPAYDSQCCKLVRDPKWTDQCLCAVVSSH---FPGVDETKALNLAHDCGRRVPKGIYCDGRPVPP
2RKN Chain:A ((4-75))
-LCGMSQDELNECKPAVSKENPTSP--SQPCCTALQHA--DFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAP-----------
General information:
TITO was launched using:
RESULT:
Template:
2RKN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4267 for 436 contacts (-9.8/contact) +
2D Compatibility (PS) -7319 + (NN) -5649 + (LL) 380
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -20555.0 ( -47.14 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_2RKN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RKN-query.scw
PDB file :
Tito_Scwrl_2RKN.pdb
: