Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATAQCRSLTEYSPCLDAVTTGAEPTDQCCETLAGVMSMDDG-----LACLCDALTSDAASSL-GIRTSDAVQLPSKCQAKTGLTYTHGYNCKGATVP
1T12 Chain:A ((6-89))
-----QVTSNLAPCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQIACTC---LKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSK----
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35328 for 574 contacts (-61.5/contact) +
2D Compatibility (PS) -8192 + (NN) -2947 + (LL) 1112
1D Compatibility (HY) -5600 + (ID) 950
Total energy: -51905.0 ( -90.43 by residue)
QMean score : 0.409
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: