Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
WTVNIPTPQSSCPLANPLSLNVCVDLLGLVHVVLGNPSTVECCDIINGL-GIDATVCLCTAIHLKVLGLNVDIPLALKLLVT-CGRELPNGLTC---
1HYP Chain:? ((6-80))
--PSCP------------DLSICLNILGGS-----LGTVDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRSYPSNATCPRT
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83809 for 457 contacts (-183.4/contact) +
2D Compatibility (PS) -7219 + (NN) -3255 + (LL) 984
1D Compatibility (HY) -8800 + (ID) 1300
Total energy: -103399.0 ( -226.26 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: