Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DTTCDNNINGILSNCK-----S--TNPSPACCSFMRKITLECVCPRITSD-VTK-YISLSSILTIAKICHRTLPHQYQCGSYLLP
2RKN Chain:A ((2-75))
IDLCGMSQDEL-NECKPAVSKENPTSPSQPCCTALQHADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAP----------
General information:
TITO was launched using:
RESULT:
Template:
2RKN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37059 for 396 contacts (-93.6/contact) +
2D Compatibility (PS) -6457 + (NN) 142 + (LL) 668
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -44956.0 ( -113.53 by residue)
QMean score : 0.299
(partial model without unconserved sides chains):
PDB file :
Tito_2RKN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RKN-query.scw
PDB file :
Tito_Scwrl_2RKN.pdb
: