Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQLPQGCGPKLGVLLPCLPFLQGQGSNPTQPCCNGLETVVKLNP-------ACLCALVNS---QLGNRINITLALSLPSLCNLAGV----TIDLCNPTGKFSFKI
1AFH Chain:A ((3-91))
-----SCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAAGVS-GLNAGNAASIPSKCGVSIPYTISTSTDCSR--------
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45124 for 527 contacts (-85.6/contact) +
2D Compatibility (PS) -7673 + (NN) -3241 + (LL) 1084
1D Compatibility (HY) -1600 + (ID) 1150
Total energy: -57704.0 ( -109.50 by residue)
QMean score : 0.305
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: