Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACDATNNMGKLLPCRQAAVKNGKDPKQLAGCCDAVKPFSGSKDAADCLCQSLLAAQK-V----------DKTVDLHSAIAIPAKCGIPVQANLNCNGMAVPQH
2DS2 Chain:B ((5-64))
-------------------------PALRQCCNQLRQVDRP-----CVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNI-------------
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22473 for 266 contacts (-84.5/contact) +
2D Compatibility (PS) -5284 + (NN) -4807 + (LL) 1620
1D Compatibility (HY) -4000 + (ID) 650
Total energy: -35594.0 ( -133.81 by residue)
QMean score : 0.262
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: